BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030D06LP1|AL429212
(978 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1747 1887 0.0
3x_Contig1771 177 3e-44
3x_Contig1684 177 3e-44
3x_Contig1444 171 2e-42
3x_Contig1564 165 1e-40
3x_Contig753 161 2e-39
3x_Contig208 131 2e-30
>3x_Contig1747
Length = 15671
Score = 1887 bits (948), Expect = 0.0
Identities = 968/978 (98%)
Strand = Plus / Plus
Query: 1 gatcaacgaaagcatggatgcgattttgaatcaattaaatgggttaaacattacccttga 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 7072 gatcaacgaaagcatggatgccattttgaatcaattaaatgggttaaacattacccttga 7131
Query: 61 raatagtatagcagtggggaaggaatttgaaaacgtatcacagatatggaaactgttcta 120
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7132 aaatagtatagcagtcgggaaggaatttgaaaacgtatcacagatatggaaactgttcta 7191
Query: 121 taatgggcttgagtgtgaagaacagaatatggagacggtaggagtagcagattctgaaca 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7192 taatgggcttgagtctgaagaacagaatatggagacggtaggagtagcagattctgaaca 7251
Query: 181 tattacggaggatgtcaatcctgaagggaaatagagaattggttttatatcaagaaaggs 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7252 tattacggaggatgtcaatcctgaagggaaatagagaattggttttatatcaagaaaggc 7311
Query: 241 acaaattgaggaacttgataagctttgcagataaaacttaccagccaatgaactacagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7312 acaaattgaggaacttgataagctttgcagataaaacttaccagccaatgaactacagca 7371
Query: 301 acgtgtcgcatcataagtatttttcatcagttgtttgttctagaagtgtgcttctataga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7372 acgtgtcgcatcataagtatttttcatcagttgtttgttctagaagtgtgcttctataga 7431
Query: 361 cggtatatatatgtrgaccgtttggtacaggataaaaagaaagttaagaacacgccacat 420
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7432 cggtatatatatgtagaccgtttggtacaggataaaaagaaagttaagaacacgccacat 7491
Query: 421 atttttcatcagtttctgcttaaatttcgtgcgtgttctactaatctcttgatttgcatc 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 7492 atttttcatcagtttctgcttaaatttcgtgcgtcttctactaatctcttgatttgcatc 7551
Query: 481 cgaagctatacttgtattgaagggaaatggggcaatatgtttaacaccctcgaggaaaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7552 cgaagctatacttgtattgaagggaaatggggcaatatgtttaacaccctcgaggaaaac 7611
Query: 541 aagtgcatactgacagaagggattgtggcatttagcgttactttttgctgggcaacaaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7612 aagtgcatactgacagaagggattgtggcatttagcgttactttttgctgggcaacaaca 7671
Query: 601 agaagttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7672 agaagttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcg 7731
Query: 661 gttcgatcccgctaggaaccattctttttttcaaaaattcctctctttcttaagtataca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7732 gttcgatcccgctaggaaccattctttttttcaaaaattcctctctttcttaagtataca 7791
Query: 721 atgtaacgctgaacctcttaataatacggaatatcttccatcagtcagtcgaagtgagcb 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7792 atgtaacgctgaacctcttaataatacggaatatcttccatcagtcagtcgaagtgagca 7851
Query: 781 aatggaatattatcacccacaatggtaatgctggtccccctgcctacgttattatcctat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7852 aatggaatattatcacccacaatggtaatgctggtccccctgcctacgttattatcctat 7911
Query: 841 attctctatctttaagtccaatgcagcttgacgcgacttttctcttttgagcmaaaaaca 900
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 7912 attctctatctttaagtccaatgcagcttgacgcgacttttctcttttgagcaaaaaaca 7971
Query: 901 actttcttcaatagaaagagaatctgcaatttgatgtttaaacagatcaagttctggagg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7972 actttcttcaatagaaagagaatctgcaatttgatgtttaaacagatcaagttctggagg 8031
Query: 961 rgtaaaacagatgtttgg 978
|||||||||||||||||
Sbjct: 8032 agtaaaacagatgtttgg 8049
>3x_Contig1771
Length = 25932
Score = 177 bits (89), Expect = 3e-44
Identities = 92/93 (98%)
Strand = Plus / Plus
Query: 599 caagaagttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcag 658
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12894 caagaaattggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcag 12953
Query: 659 cggttcgatcccgctaggaaccattcttttttt 691
|||||||||||||||||||||||||||||||||
Sbjct: 12954 cggttcgatcccgctaggaaccattcttttttt 12986
>3x_Contig1684
Length = 14609
Score = 177 bits (89), Expect = 3e-44
Identities = 95/97 (97%)
Strand = Plus / Minus
Query: 594 aacaacaagaagttggttccttggcccagttggttaaggcaccgtgctaataacgcgggg 653
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9559 aacaataagaaattggttccttggcccagttggttaaggcaccgtgctaataacgcgggg 9500
Query: 654 atcagcggttcgatcccgctaggaaccattctttttt 690
|||||||||||||||||||||||||||||||||||||
Sbjct: 9499 atcagcggttcgatcccgctaggaaccattctttttt 9463
>3x_Contig1444
Length = 7580
Score = 171 bits (86), Expect = 2e-42
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 606 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5666 ttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcg 5725
Query: 666 atcccgctaggaaccattcttttttt 691
||||||||||||||||||||||||||
Sbjct: 5726 atcccgctaggaaccattcttttttt 5751
>3x_Contig1564
Length = 11038
Score = 165 bits (83), Expect = 1e-40
Identities = 83/83 (100%)
Strand = Plus / Minus
Query: 607 tggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcga 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5415 tggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggttcga 5356
Query: 667 tcccgctaggaaccattcttttt 689
|||||||||||||||||||||||
Sbjct: 5355 tcccgctaggaaccattcttttt 5333
>3x_Contig753
Length = 2743
Score = 161 bits (81), Expect = 2e-39
Identities = 81/81 (100%)
Strand = Plus / Plus
Query: 603 aagttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 aagttggttccttggcccagttggttaaggcaccgtgctaataacgcggggatcagcggt 2044
Query: 663 tcgatcccgctaggaaccatt 683
|||||||||||||||||||||
Sbjct: 2045 tcgatcccgctaggaaccatt 2065
>3x_Contig208
Length = 1357
Score = 131 bits (66), Expect = 2e-30
Identities = 69/70 (98%)
Strand = Plus / Minus
Query: 620 cagttggttaaggcaccgtgctaataacgcggggatcagcggttcgatcccgctaggaac 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1357 cagttggttaaggcaccgtgctaataacgcggggatcagcggttcgatcccgctaggaac 1298
Query: 680 cattcttttt 689
|||| |||||
Sbjct: 1297 cattattttt 1288
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7711
Number of Sequences: 1807
Number of extensions: 7711
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 7
length of query: 978
length of database: 10,358,551
effective HSP length: 16
effective length of query: 962
effective length of database: 10,329,639
effective search space: 9937112718
effective search space used: 9937112718
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)